Query (optional)   in Class  

GrainGenes Marker Report: Xwmc235-5B

[Submit comment/correction]

Locus
Xwmc235-5B
Type
Microsatellite
Chromosome
5B
Map
Ta-SSR-2004-5B138.7
[ Show Nearby Loci ]
Map Data
Durum wheat, Svevo x Ciccio
Wheat, Consensus SSR, 2004
Probe
WMC235
Reference
ReferenceSomers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
Possible Orthologs
Xwmc235
wmc235-5B
wmc235



Probe for Locus
WMC235
Locus
Xwmc235
Xwmc235-5B
wmc235-5B
wmc235
Reference
ReferenceSomers DJ and Isaac P (2004) SSRs from the Wheat Microsatellite Consortium.
General Remarks
Wheat Microsatellite Consortium Project 1, Plate reference 5d1
Donor: Sharp, Camden
Location from nullisomic/tetrasomic (Daryl Somers, AgCanada, Feb 2001) : 231 bases located on 5B
Trimmed to insert at 5' end and to Rsa1 at 3' end.(CA)25 178 to 227
Type
PCR
SSR
PCR primers
Forward AcTgTTccTATccgTgcAcTgg at 86 length 22 bases, Tm 65
Reverse gAggcAAAgTTcTggAggTcTg at 299 length 22 bases, Tm 64
SSR size
235 bases expected, Chinese Spring
Amplification Conditions
61C anneal, product; 61C anneal, polymorphic on acrylamide;
Sequence
WMC235
Source Species
Triticum aestivum