Query (optional)   in Class  

GrainGenes Marker Report: Xwmc36

[Submit comment/correction]

Locus
Xwmc36
Type
Microsatellite
Chromosome
1D
Map
Wheat-Composite2004-1D71
[ Show Nearby Loci ]
Map Data
Wheat, Composite, 2004
Probe
WMC36
Possible Orthologs
Xwmc36-1D
wmc36



Probe for Locus
WMC36
Locus
Xwmc36
Xwmc36-1D
wmc36
Reference
ReferenceSomers DJ and Isaac P (2004) SSRs from the Wheat Microsatellite Consortium.
General Remarks
Wheat Microsatellite Consortium Project 1, Plate reference 2a12
Donor: Wang, Utah
Several microsatellites, one (CA)36(GT)36 383 to 454. Multiple inserts (2) in this fragment (joined by linker 300-313). First insert is member of 1G1, 2F8 2D11, 2H11, 2A12, 6G1, 6H3, 6H4, 6B11, 7e3, 7h5, 7b6, 8a11, 5h10, 5d12, 11d4, 9H3. Primer designed against second insert 19.6.97. Bases 33 to 87 show homology to 25a1 bases 62 to 116 (complement) (55 in longest run, maxScore = 28). Duplicate with 25a1, 2a12 has priority.
Type
PCR
SSR
PCR primers
Forward TTcTcTTTTccTTTcgcAcTcc at 335 length 22 bases, Tm 64
Reverse cATcAgTTgTggggTTTcTTcA at 474 length 22 bases, Tm 64
SSR size
161 bases expected, Chinese Spring
Sequence
WMC36
Source Species
Triticum aestivum