Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: Xwmc41

[Submit comment/correction]

Locus	Xwmc41
Type	Microsatellite
Chromosome	2D
Map	Ta-NxW-2D 180.5 Wheat-2008-Corrigin-CS(T2D)-2D 110 Wheat-Composite2004-2D 97
	[ Show Nearby Loci ]
Map Data	Wheat 2008, Corrigin x CS(T2D), C gene Wheat, Composite, 2004 Wheat, Nanda2419 x Wangshuibai
Probe	WMC41
Possible Orthologs	Xwmc41-2D wmc41
Probe for Locus	WMC41
Locus	Xwmc41-2D Xwmc41 wmc41
Synonym	Synonym HAR35_28634
Reference	Somers DJ and Isaac P (2004) SSRs from the Wheat Microsatellite Consortium.
General Remarks	Wheat Microsatellite Consortium Project 1, Plate reference 6c1.2 Donor: Dubcovsky, Buenos Aires Location from nullisomic/tetrasomic (Daryl Somers, AgCanada, Feb 2001) : 115 bases located on 2D, 154 bases located on 2D, 164 bases located on 2D AGR51. Multiple inserts (2) joined 260-277. Trimmed to insert at 3' end. (GA)25 138 to 187, (GCC)7 552 to 572. Primers shown here are for second insert. Products obtained after PCR at 61C anneal, (>2 loci) - polymorphic on agarose.
Type	PCR SSR
PCR primers	Forward TcccTcTTccAAgcgcggATAg at 484 length 22 bases, Tm 70 Reverse ggAggAAgATcTcccggAgcAg at 625 length 22 bases, Tm 69
SSR size	163 bases expected, Chinese Spring
Amplification Conditions	61C anneal, polymorphic product on agarose; 61C anneal, polymorphic on acrylamide;
Sequence	WMC41
Source Species	Triticum aestivum