GrainGenes Marker Report: Xwmc41-2D
Locus
Xwmc41-2D
Type
Microsatellite
Chromosome
2D
Chromosome Arm
2DL
Map
Louise/Penawawa-2D 6.8 Ta-SSR-2004-2D 82.8 Ta-Synthetic/Opata-SSR2-2D 170.4 Triticum-WxM-FHB-QTL-2D 142
[ Show Nearby Loci ]
QTL with Locus Marker
QGpc.ccsu-2D QYm.nau-2D
Map Data
Wheat, Consensus SSR, 2004 Wheat, Louise x Penawawa Wheat, Synthetic x Opata, SSR 2 Wheat, WxM, FHB QTL
Probe
WMC41
QTL Linked with Locus
QGpc.ccsu-2D
Reference
Possible Orthologs
Xwmc41 wmc41
Probe for Locus
WMC41
Locus
Xwmc41-2D Xwmc41 wmc41
Synonym
Synonym HAR35_28634
Reference
Somers DJ and Isaac P (2004) SSRs from the Wheat Microsatellite Consortium.
General Remarks
Wheat Microsatellite Consortium Project 1, Plate reference 6c1.2 Donor: Dubcovsky, Buenos Aires Location from nullisomic/tetrasomic (Daryl Somers, AgCanada, Feb 2001) : 115 bases located on 2D, 154 bases located on 2D, 164 bases located on 2D AGR51. Multiple inserts (2) joined 260-277. Trimmed to insert at 3' end. (GA)25 138 to 187, (GCC)7 552 to 572. Primers shown here are for second insert. Products obtained after PCR at 61C anneal, (>2 loci) - polymorphic on agarose.
Type
PCR SSR
PCR primers
Forward TcccTcTTccAAgcgcggATAg at 484 length 22 bases, Tm 70
Reverse ggAggAAgATcTcccggAgcAg at 625 length 22 bases, Tm 69
SSR size
163 bases expected, Chinese Spring
Amplification Conditions
61C anneal, polymorphic product on agarose; 61C anneal, polymorphic on acrylamide;
Sequence
WMC41
Source Species
Triticum aestivum
GrainGenes Marker Report: Xwmc41-2D
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
| ||||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
| ||||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
|