Query (optional)   in Class  

GrainGenes Marker Report: Xwmc441

[Submit comment/correction]

Locus
Xwmc441
Type
Microsatellite
Chromosome
2B
Map
Svevo/Ciccio-2B119.1
Wheat-Composite2004-2B87
[ Show Nearby Loci ]
Breakpoint Interval
C-2BL6-0.89
Map Data
Durum wheat, Svevo x Ciccio
Wheat, Composite, 2004
Probe
WMC441
Possible Orthologs
Xwmc441-2B
[ Show all 7 ]



Probe for Locus
WMC441
Locus
Xwmc441-2B
[ Show all 8 ]
Reference
ReferenceSomers DJ and Isaac P (2004) SSRs from the Wheat Microsatellite Consortium.
General Remarks
Wheat Microsatellite Consortium Project 1, Plate reference 24d6
Donor: ITCF
Location from nullisomic/tetrasomic (Daryl Somers, AgCanada, Feb 2001) : 159 bases located on 2B
Trimmed to insert at both ends. Bases 144 to 164 show homology to 17h7 bases 131 to 151 (21 in longest run, maxScore = 38). (CA)10 53 to 72, (CG)9 73 to 90, (CT)9 35 to 52.
Type
PCR
SSR
PCR primers
Forward TccAgTAgAgcAccTTTcATT at 5 length 21 bases, Tm 58
Reverse ATcAcgAAgATAAAcAAAcgg at 142 length 21 bases, Tm 58
SSR size
158 bases expected, Chinese Spring
Amplification Conditions
51C anneal, polymorphic on acrylamide (complex).
Sequence
WMC441
Source Species
Triticum aestivum