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GrainGenes Marker Report: Xwmc457

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Locus
Xwmc457
Type
Microsatellite
Chromosome
4D
Map
Wheat, UC1110 x PI610750 4D63.5
Wheat, UC1110 x PI610750 4D63.8
Wheat-Composite2004-4D47
[ Show Nearby Loci ]
Map Data
Wheat, Composite, 2004
Wheat, UC1110 x PI610750
Probe
WMC457
Reference
ReferenceLowe I et al. (2011) Mapping and validation of QTL which confer partial resistance to broadly virulent post-2000 North American races of stripe rust in hexaploid wheat Theoretical and Applied Genetics 123:143-157.
Possible Orthologs
Xwmc457-4D
wmc457



Probe for Locus
WMC457
Locus
Xwmc457-4D
Xwmc457
wmc457
Reference
ReferenceSomers DJ and Isaac P (2004) SSRs from the Wheat Microsatellite Consortium.
General Remarks
Wheat Microsatellite Consortium Project 1, Plate reference 2d5.1
Donor: IGS BioTech
Location from nullisomic/tetrasomic (Daryl Somers, AgCanada, Feb 2001) : 164 bases located on 4D,4A
No overlap between forward and reverse sequences. Multple inserts in this clone, this is the first insert. Trimmed to insert at both ends. (CA)13 342 to 367.
Type
PCR
SSR
PCR primers
Forward cTTccATgAATcAAAgcAgcAc at 243 length 22 bases, Tm 64
Reverse cATccATggcAgAAAcAATAgc at 380 length 22 bases, Tm 63
SSR size
159 bases expected, Chinese Spring
Amplification Conditions
61C anneal, polymorphic on acrylamide.
Sequence
WMC457
Source Species
Triticum aestivum