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GrainGenes Marker Report: Xwmc500c

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Locus
Xwmc500c
Type
Microsatellite
Chromosome
1B
Map
Svevo/Ciccio-1B23.6
Wheat-Composite2004-1B28
[ Show Nearby Loci ]
Breakpoint Interval
1BS.sat-0.31
Map Data
Durum wheat, Svevo x Ciccio
Wheat, Composite, 2004
Probe
WMC500
Possible Orthologs
wmc500
[ Show all 26 ]



Probe for Locus
WMC500
Locus
Xwmc500-3B
[ Show all 28 ]
Reference
ReferenceSomers DJ and Isaac P (2004) SSRs from the Wheat Microsatellite Consortium.
General Remarks
Wheat Microsatellite Consortium Project 1, Plate reference 25b12
Donor: Serasem
Location from nullisomic/tetrasomic (Daryl Somers, AgCanada, Feb 2001) : 155 bases located on 2B, 165 bases located on 7B, 180 bases located on 1B, 188 bases located on 3B, 204 bases located on 4A
Trimmed to insert at both ends. (CA)13 38 to 63, (CA)10 66 to 85.
Type
PCR
SSR
PCR primers
Forward ATAgcATgTTggAAcAgAgcAc at 15 length 22 bases, Tm 61
Reverse cTTAgATgcAAcTcTATgcggT at 178 length 22 bases, Tm 60
SSR size
185 bases expected, Chinese Spring
Amplification Conditions
51C anneal, polymorphic on acrylamide (polymorphism is superimposed on smear, 150-190 bases, complex).
Sequence
WMC500
Source Species
Triticum aestivum