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GrainGenes Marker Report: Xwmc581-7B

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Locus
Xwmc581-7B
Type
Microsatellite
Chromosome
7B
Map
CS/SQ1-7B188.5
Kofa/UC1113-7B183.4
Ta-SSR-2004-7B137.9
[ Show Nearby Loci ]
QTL with Locus Marker
QYld.saq-7B
Map Data
Durum wheat, Kofa x UC1113
Durum wheat, Svevo x Ciccio
Wheat, Chinese Spring x SQ1
Wheat, Consensus SSR, 2004
Probe
WMC581
Reference
ReferenceSomers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
Possible Orthologs
Xwmc581
wmc581
wmc581-7B



Probe for Locus
WMC581
Locus
Xwmc581-7B
Xwmc581
wmc581
wmc581-7B
Reference
ReferenceSomers DJ and Isaac P (2004) SSRs from the Wheat Microsatellite Consortium.
General Remarks
Wheat Microsatellite Consortium Project 1, Plate reference 15h3.2
Donor: Aventis
Multiple inserts in this clone, this is the second insert. Trimmed to insert at both ends. Bases 104 to 161 (complement) show homology to 6g11 bases 194 to 251 (58 in longest run, maxScore = 55). (GT)23 36 to 81, (GT)8 83 to 98. Reverse primer matches 6g11 sequence. Foward primer is unique.
Type
PCR
SSR
PCR primers
Forward cATgTTgccATcAAAcTcgc at 10 length 20 bases, Tm 64
Reverse gctaTTgAcATgcAAcTATggAcct at 108 length 25 bases, Tm 64
SSR size
123 bases expected, Chinese Spring
Sequence
WMC581
Source Species
Triticum aestivum