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GrainGenes Marker Report: cdo506b

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Locus	cdo506b
Type	RFLP
Chromosome	5H
Map	Barley-consensus-2003-5H 93.1 Oat-2001-KxM_22 22 Oat-KxO/2003-22_44+18 94.4
	[ Show Nearby Loci ]
Map Data	Barley consensus 2003 Oat, KxO, 2003 Oat-2001-KxM
Probe	CDO506
Homology	A83106 e-value: 8.4 hypothetical protein PA4320 [imported] - Pseudomonas aeruginosa (strain PAO1) AAH04729 e-value: 8e-08 (BC004729) RIKEN cDNA 1810063P04 gene [Mus musculus]
Data Source	Langridge, Peter J.
Remark	Marker placement value = 2.35 cM on map Oat-KxO/2003-22_44+18 Marker is not a framework marker on map Oat-KxO/2003-22_44+18
Possible Orthologs	CDO506 [ Show all 12 ]
Probe for Locus	CDO506
Locus	CDO506 [ Show all 16 ]
Synonym	Synonym HAR35_17150 HAR35_41262
External Databases	DDBJ EMBL GenBank
Reference	Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks	Uni-ZAP XR library OatUni-ZAPXR [c] OatUni-ZAPXR
Type	cDNA STS
PCR primers	TCA TTC AGA GGA AGA ACT GC ATA GTG GAG CAA AGA CTG TC
Sequence	BE439286 BE439294 CDO506_WHE04G12.s1 CDO506
Polymorphism	CDO506 EcoRI CDO506 EcoRV
Linkage Group	[b 7L]
Insert Enzyme	EcoRI XhoI
Source Species	Avena sativa
Source Germplasm	Brooks (oat)
Source Tissue	etiolated leaf
Insert Size	1.2 1.4 0.6