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GrainGenes Marker Report: k00164

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Locus	k00164
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 87.6
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baak17d18
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = TCTTTTGCTTYGGGTTGGGAC Parent 1 SNP sequence = TCTTTTGCTTCGGGTTGGGAC Parent 2 SNP sequence = TCTTTTGCTTTGGGTTGGGAC
Probe for Locus	baak17d18
Locus	k00164
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = endonuclease III homologue [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - AACTCGAATCAGATCAGCCC Right 5' - CTCTCCCTCCCACTCCTTTC
Sequence	BJ447770
PCR size	383