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GrainGenes Marker Report: k00173

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Locus	k00173
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 210.6
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baak15p20
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/C SNP structure (UNICODE) = CTGATGAACAYCTAAGATTTC Parent 1 SNP sequence = CTGATGAACATCTAAGATTTC Parent 2 SNP sequence = CTGATGAACACCTAAGATTTC
Probe for Locus	baak15p20
Locus	k00173
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = ESTs AU029294(E30104),C73989(E30104) correspond to a region of the predicted gene.~hypothetical protein [Oryza sativa
Type	PCR
PCR primers	Left 5' - CGTCTTACAACTTCGTGGCA Right 5' - ACAAGGAAGAAGAAGCAGCG
Sequence	BJ455089
PCR size	404