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GrainGenes Marker Report: k00222

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Locus	k00222
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 309.6
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baak20b06
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/A SNP structure (UNICODE) = CACACTCATCRATCCATTCGC Parent 1 SNP sequence = CACACTCATCGATCCATTCGC Parent 2 SNP sequence = CACACTCATCAATCCATTCGC
Probe for Locus	baak20b06
Locus	k00222
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = P0519E12.3 [Oryza sativa (japonica cultivar-group)] sp Q8LHP0 U222_ORYSA Hypothetical UPF0222 protein P0519E12.3
Type	PCR
PCR primers	Left 5' - AGCGCTCAAGCATATCCAGT Right 5' - TGAAGTAGTGGCTGATCCCC
Sequence	CA017813
PCR size	371