Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k00223

[Submit comment/correction]

Locus	k00223
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 102.8
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baak20d17
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = GCGCAGGGTGYAGTTCTCCTG Parent 1 SNP sequence = GCGCAGGGTGCAGTTCTCCTG Parent 2 SNP sequence = GCGCAGGGTGTAGTTCTCCTG
Probe for Locus	baak20d17
Locus	k00223
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = unknown protein [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - AAGGATTTCCTCCACCATCC Right 5' - GAAGGGATGAGCATGACGAT
Sequence	BJ456236
PCR size	390