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GrainGenes Marker Report: k00263

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Locus	k00263
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 164.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baak21f10
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = A/N SNP structure (UNICODE) = CGGAAAATGCA/NGGANCNAGGA Parent 1 SNP sequence = CGGAAAATGCAGGANCNAGGA Parent 2 SNP sequence = CGGAAAATGCNGGANCNAGGA
Probe for Locus	baak21f10
Locus	k00263
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = anion-transporting ATPase, putative [Arabidopsis thaliana] ref NP_849575.1 anion-transporting ATPase, putative [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - GTACATATCACGGCGTGCAG Right 5' - AGCTGGTGCTGCTTACAACA
Sequence	BJ461950
PCR size	439