Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k00299

[Submit comment/correction]

Locus	k00299
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 73.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baak26a02
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/G SNP structure (UNICODE) = GGCAAGTTATSATAAATAATA Parent 1 SNP sequence = GGCAAGTTATCATAAATAATA Parent 2 SNP sequence = GGCAAGTTATGATAAATAATA
Probe for Locus	baak26a02
Locus	k00299
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = expressed protein [Arabidopsis thaliana] gb AAK62598.1 At1g50450/F11F12_20 [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - GACACAGGACCTGAAGCACA Right 5' - CGGCAGGCTCTACTATGAGG
Sequence	BJ457050
PCR size	354