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GrainGenes Marker Report: k00498

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Locus	k00498
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 253.1
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baak32p24
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = GCACCTTTCTYCGCTGCCCTG Parent 1 SNP sequence = GCACCTTTCTCCGCTGCCCTG Parent 2 SNP sequence = GCACCTTTCTTCGCTGCCCTG
Probe for Locus	baak32p24
Locus	k00498
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBa0084K01.19 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CCTGCCAGTCCCATTACACT Right 5' - GACAGCTCTCCACACAAGCA
Sequence	BJ458678
PCR size	351