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GrainGenes Marker Report: k00526

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Locus	k00526
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 122.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baak34c01
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = A/G SNP structure (UNICODE) = GCATGTCGTCRTTGTCCCCAT Parent 1 SNP sequence = GCATGTCGTCATTGTCCCCAT Parent 2 SNP sequence = GCATGTCGTCGTTGTCCCCAT
Probe for Locus	baak34c01
Locus	k00526
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = hypothetical protein T22H22.14 [imported] - Arabidopsis thaliana gb AAC64884.1 Strong similarity to F21B7.33 gi 2809264 from A. thaliana BA
Type	PCR
PCR primers	Left 5' - AAAACAGGGAATATTGGGGC Right 5' - GAACTGAGGCGTGCACATAA
Sequence	BJ458969
PCR size	373