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GrainGenes Marker Report: k00552

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Locus
k00552
Type
SNP
Chromosome
4H
Map
Hv-HNxH602-4H4.1
[ Show Nearby Loci ]
Map Data
Barley, HN x H602, Sato2009
Species
Hordeum vulgare
Hordeum vulgare subsp. spontaneum
Probe
baak35b06
Reference
ReferenceSato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark
SNP = G/A
SNP structure (UNICODE) = TCAATTTTGCRAAACCCGCCT
Parent 1 SNP sequence = TCAATTTTGCGAAACCCGCCT
Parent 2 SNP sequence = TCAATTTTGCAAAACCCGCCT



Probe for Locus
baak35b06
Locus
k00552
Reference
ReferenceSato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks
Best BLAST Hit = lipase (class 3) family [Arabidopsis thaliana] pir A84854 hypothetical protein At2g42450 [imported] - Arabidopsis thaliana
Type
PCR
PCR primers
Left 5' - CTACCAAGGCCAGCTCTCAC
Right 5' - GTTCTCTGAGGCACCAGGAC
Sequence
BJ455109
PCR size
392