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GrainGenes Marker Report: k00586

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Locus	k00586
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 253.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baak38o02
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/C SNP structure (UNICODE) = CCACGACGTASGTACGTCGTT Parent 1 SNP sequence = CCACGACGTAGGTACGTCGTT Parent 2 SNP sequence = CCACGACGTACGTACGTCGTT
Probe for Locus	baak38o02
Locus	k00586
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = P0512C01.32 [Oryza sativa (japonica cultivar-group)] dbj BAB92377.1 P0512C01.32 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - AACTCCGATGATTTTCCGTG Right 5' - CGCTACTGGTTGGATTTGGT
Sequence	BJ452400
PCR size	407