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GrainGenes Marker Report: k00646

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Locus	k00646
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 26.8
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baak39a14
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/C SNP structure (UNICODE) = TCTCTGATTCYTTCAAATACT Parent 1 SNP sequence = TCTCTGATTCTTTCAAATACT Parent 2 SNP sequence = TCTCTGATTCCTTCAAATACT
Probe for Locus	baak39a14
Locus	k00646
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative leucyl-tRNA synthetase [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CTCGAAACAAGGAAAATCCG Right 5' - TCCAGAACCAGGAAGAATGG
Sequence	BJ459988
PCR size	365