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GrainGenes Marker Report: k00788

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Locus	k00788
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 118.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baak46g03
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = A/G SNP structure (UNICODE) = TGGCAAACACRGATTTATAAC Parent 1 SNP sequence = TGGCAAACACAGATTTATAAC Parent 2 SNP sequence = TGGCAAACACGGATTTATAAC
Probe for Locus	baak46g03
Locus	k00788
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = unknown protein [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - AGTTGTCAGACCCAACCCAG Right 5' - GAGGTATTCGAGTTGAGCCG
Sequence	CA005053
PCR size	355