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GrainGenes Marker Report: k00807

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Locus	k00807
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 171.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baak44h11
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/A SNP structure (UNICODE) = AACTGTAAGCRGAGAGATGCA Parent 1 SNP sequence = AACTGTAAGCGGAGAGATGCA Parent 2 SNP sequence = AACTGTAAGCAGAGAGATGCA
Probe for Locus	baak44h11
Locus	k00807
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = expressed protein [Arabidopsis thaliana] gb AAK49628.1 At1g26660/T24P13_4 [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - CAAGTGCTGGAACTGGTTGA Right 5' - GGTGGTATGAGGGGATGATG
Sequence	BJ461324
PCR size	431