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GrainGenes Marker Report: k00878

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Locus	k00878
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 139.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baal10h19
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = A/G SNP structure (UNICODE) = GGATACCAAGRGTCCTGGAGA Parent 1 SNP sequence = GGATACCAAGAGTCCTGGAGA Parent 2 SNP sequence = GGATACCAAGGGTCCTGGAGA
Probe for Locus	baal10h19
Locus	k00878
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBa0060P14.3 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CCTCTGTACACGGACCCACT Right 5' - CGACATAGGCAACGACACAC
Sequence	AV936205
PCR size	406