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GrainGenes Marker Report: k00940

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Locus	k00940
Type	SNP
Chromosome	7H
Map	Hv-HNxH602-7H 169.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baal12h12
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/A SNP structure (UNICODE) = ATCATGGAGAWACTGCAAGGT Parent 1 SNP sequence = ATCATGGAGATACTGCAAGGT Parent 2 SNP sequence = ATCATGGAGAAACTGCAAGGT
Probe for Locus	baal12h12
Locus	k00940
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = unnamed protein product [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - TGTCCTCATGCTGAGACCTG Right 5' - AAGGCTCGTGCGTCAATAGT
Sequence	BJ473431
PCR size	431