Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k00942

[Submit comment/correction]

Locus	k00942
Type	CAPS
Chromosome	2H
Map	Hv-HNxH602-2H 108.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baal13d11
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	Restriction enzyme used for CAPS analysis = PstI [ Show all 6 ]
Probe for Locus	baal13d11
Locus	k00942
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = contains ESTs AU173916(S20786),AU173917(S20786)~similar to Arabidopsis thaliana chromosome 5, At5g13720~unknown
Type	PCR
PCR primers	Left 5' - CATCGCGGTTCTTCTTTTTC Right 5' - ATGAGCAGCTCCATTTTTGG
Sequence	BJ475937
PCR size	473