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GrainGenes Marker Report: k01240

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Locus	k01240
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 74.1
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baal30b10
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/C SNP structure (UNICODE) = AAGATTTGGGYTTCTACTTAT Parent 1 SNP sequence = AAGATTTGGGTTTCTACTTAT Parent 2 SNP sequence = AAGATTTGGGCTTCTACTTAT
Probe for Locus	baal30b10
Locus	k01240
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = P0672D08.27 [Oryza sativa (japonica cultivar-group)] dbj BAB62638.1 hypothetical protein~similar to Arabidopsis thaliana chromosome 5,
Type	PCR
PCR primers	Left 5' - TCGCTCCATAGGAACAAACC Right 5' - CTTCACGCTGAGCGACTTCT
Sequence	BJ475826
PCR size	370