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GrainGenes Marker Report: k01268

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Locus	k01268
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 131.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baal3e14
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/C SNP structure (UNICODE) = GTCGGAGCATYGCTCACATAT Parent 1 SNP sequence = GTCGGAGCATTGCTCACATAT Parent 2 SNP sequence = GTCGGAGCATCGCTCACATAT
Probe for Locus	baal3e14
Locus	k01268
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = COG0060: Isoleucyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
Type	PCR
PCR primers	Left 5' - AAGAAAGCAACCTGCCACAT Right 5' - CACAGTTTCTCTGCGAGGTG
Sequence	AV935206
PCR size	362