Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k01300

[Submit comment/correction]

Locus	k01300
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 106
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baal39c19
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = TCACCCGGTGYGACGTGCCAA Parent 1 SNP sequence = TCACCCGGTGCGACGTGCCAA Parent 2 SNP sequence = TCACCCGGTGTGACGTGCCAA
Probe for Locus	baal39c19
Locus	k01300
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative ripening-related protein [Vitis vinifera]
Type	PCR
PCR primers	Left 5' - ATGCCTCCAAGATTCATCCA Right 5' - GCCATTTTCGCTCTTGTGTT
Sequence	BJ548905
PCR size	413