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GrainGenes Marker Report: k01366

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Locus	k01366
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 51.8
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baal6a09
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = A/G SNP structure (UNICODE) = GAATAAGAAARCATTTCTTCC Parent 1 SNP sequence = GAATAAGAAAACATTTCTTCC Parent 2 SNP sequence = GAATAAGAAAGCATTTCTTCC
Probe for Locus	baal6a09
Locus	k01366
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = VTC2 [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - CGAATATGCCAATGCAACAG Right 5' - AGGACACCAACAAGATTCGG
Sequence	AV935696
PCR size	380