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GrainGenes Marker Report: k01480

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Locus	k01480
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 93.1
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baal9i11
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/C SNP structure (UNICODE) = GGCACGGGCTYGTAATTCTGG Parent 1 SNP sequence = GGCACGGGCTTGTAATTCTGG Parent 2 SNP sequence = GGCACGGGCTCGTAATTCTGG
Probe for Locus	baal9i11
Locus	k01480
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - TCCTAGTAGCAGTGTAGCGGC Right 5' - GTTCGACGTGGTGATCCAG
Sequence	AV937165
PCR size	399