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GrainGenes Marker Report: k02024

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Locus	k02024
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 291.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags13h04
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/A SNP structure (UNICODE) = CAAGCCCTGCRTCAACGACAA Parent 1 SNP sequence = CAAGCCCTGCGTCAACGACAA Parent 2 SNP sequence = CAAGCCCTGCATCAACGACAA
Probe for Locus	bags13h04
Locus	k02024
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = unknown protein [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TGTGCACAGATGAACGCATA Right 5' - CTTACCCAATGCCAAAACCA
Sequence	AV920335
PCR size	445