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GrainGenes Marker Report: k02189

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Locus	k02189
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 133.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags15b10
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = ACACTATACTYTGCAATCTGA Parent 1 SNP sequence = ACACTATACTCTGCAATCTGA Parent 2 SNP sequence = ACACTATACTTTGCAATCTGA
Probe for Locus	bags15b10
Locus	k02189
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = transport protein, putative [Arabidopsis thaliana] gb AAL67087.1 putative transport protein [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - AACCTTATTGCATGCCGAAC Right 5' - TCATCTCGGTGCTAGTGACG
Sequence	AV915563
PCR size	403