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GrainGenes Marker Report: k02358

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Locus	k02358
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 111.1
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags19n12
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/A SNP structure (UNICODE) = GAAGGCTAGCRTGAAGTTGCA Parent 1 SNP sequence = GAAGGCTAGCGTGAAGTTGCA Parent 2 SNP sequence = GAAGGCTAGCATGAAGTTGCA
Probe for Locus	bags19n12
Locus	k02358
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative chaperone-like ATPase [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TCTCAGCATCCAACAATCCA Right 5' - GAGAAGCCAAAGCACTGGAC
Sequence	AV834546
PCR size	351