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GrainGenes Marker Report: k02394

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Locus	k02394
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 103.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags19p04
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/A SNP structure (UNICODE) = GCATCCCACARCCGAAGAAGT Parent 1 SNP sequence = GCATCCCACAGCCGAAGAAGT Parent 2 SNP sequence = GCATCCCACAACCGAAGAAGT
Probe for Locus	bags19p04
Locus	k02394
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = B1112D09.9 [Oryza sativa (japonica cultivar-group)] dbj BAB90268.1 B1112D09.9 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - ACCAACAAAGCAGTATCCCG Right 5' - AGCCACCCTGAAGCATCTAA
Sequence	AV834548
PCR size	357