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GrainGenes Marker Report: k02438

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Locus	k02438
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 211.1
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags20e14
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/C SNP structure (UNICODE) = ACCTGTCCTGYTTCAGCGCGT Parent 1 SNP sequence = ACCTGTCCTGTTTCAGCGCGT Parent 2 SNP sequence = ACCTGTCCTGCTTCAGCGCGT
Probe for Locus	bags20e14
Locus	k02438
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OJ000126_13.4 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - GAAAACCTGTCAAGGGCAAA Right 5' - ATAGGATCACATCTTGGGCG
Sequence	AV833983
PCR size	465