Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k02445

[Submit comment/correction]

Locus	k02445
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 96.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags21a02
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/C SNP structure (UNICODE) = ACTTCATCAGSGCTACGTCGA Parent 1 SNP sequence = ACTTCATCAGGGCTACGTCGA Parent 2 SNP sequence = ACTTCATCAGCGCTACGTCGA
Probe for Locus	bags21a02
Locus	k02445
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative receptor-like protein kinase [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TCGTCCTCACGATCTTCCTC Right 5' - CCTGACTTCAATGGTCCGAT
Sequence	AV918424
PCR size	353