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GrainGenes Marker Report: k02563

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Locus	k02563
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 109.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags22j15
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = A/G SNP structure (UNICODE) = ATTGGCTTGCRGAATTCTCTC Parent 1 SNP sequence = ATTGGCTTGCAGAATTCTCTC Parent 2 SNP sequence = ATTGGCTTGCGGAATTCTCTC
Probe for Locus	bags22j15
Locus	k02563
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative phospholipase [Oryza sativa (japonica cultivar-group)] gb AAO00720.1 putative phospholipase [Oryza sativa (japonica cultivar-group
Type	PCR
PCR primers	Left 5' - ATTGCAGTTTTGGCAACTCC Right 5' - CAGACAACTGCACACCACCT
Sequence	AV834084
PCR size	356