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GrainGenes Marker Report: k02567

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Locus	k02567
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 110
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags23f03
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = CAGCTATAGTYATGGAAATAA Parent 1 SNP sequence = CAGCTATAGTCATGGAAATAA Parent 2 SNP sequence = CAGCTATAGTTATGGAAATAA
Probe for Locus	bags23f03
Locus	k02567
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = P0007F06.15 [Oryza sativa (japonica cultivar-group)] dbj BAB84376.1 P0007F06.15 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CCAAGAAAAATCCCCATCCT Right 5' - GTACTACGACGGCAAGTCCC
Sequence	AV921403
PCR size	500