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GrainGenes Marker Report: k02580

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Locus	k02580
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 240.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags23h03
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = TGCTTCTGAAYATTTGAGCCC Parent 1 SNP sequence = TGCTTCTGAACATTTGAGCCC Parent 2 SNP sequence = TGCTTCTGAATATTTGAGCCC
Probe for Locus	bags23h03
Locus	k02580
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = glycosyl hydrolase family 3 protein [Arabidopsis thaliana] pir T45640 beta-D-glucan exohydrolase-like protein - Arabidopsis thaliana
Type	PCR
PCR primers	Left 5' - TATGGGGAAAAGCACAGGAC Right 5' - GTACCTCCAGAGCTTCACGG
Sequence	AV921443
PCR size	392