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GrainGenes Marker Report: k02979

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Locus	k02979
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 180.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags33n09
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = A/G SNP structure (UNICODE) = ACCTTCCAATRAAATTTAGTT Parent 1 SNP sequence = ACCTTCCAATAAAATTTAGTT Parent 2 SNP sequence = ACCTTCCAATGAAATTTAGTT
Probe for Locus	bags33n09
Locus	k02979
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBa0020J04.9 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - ACCAGACAGCGTCTTTGCTT Right 5' - CCGCATTGGCTTCTACATTT
Sequence	BJ466769
PCR size	352