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GrainGenes Marker Report: k03009

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Locus	k03009
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 138.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags35b18
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/C SNP structure (UNICODE) = GAGGAGGTGCYGGCTTTCTTA Parent 1 SNP sequence = GAGGAGGTGCTGGCTTTCTTA Parent 2 SNP sequence = GAGGAGGTGCCGGCTTTCTTA
Probe for Locus	bags35b18
Locus	k03009
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = hepatocyte growth factor-regulated tyrosine kinase substrate-like protein [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CTGAGCAGGTCCAAACACAA Right 5' - GATTTGATCTACCGCCCAGA
Sequence	BJ466934
PCR size	411