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GrainGenes Marker Report: k03025

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Locus	k03025
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 94.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags33j18
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/C SNP structure (UNICODE) = GCGGTTGCAAYGCTCCACGTG Parent 1 SNP sequence = GCGGTTGCAATGCTCCACGTG Parent 2 SNP sequence = GCGGTTGCAACGCTCCACGTG
Probe for Locus	bags33j18
Locus	k03025
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = probable serine/threonine protein kinase (EC 2.7.1.-) SNFL3 - sorghum emb CAA74646.1 putative serine/threonine protein kinase [Sorghum bico
Type	PCR
PCR primers	Left 5' - AATGCCACCATCAATTCGTC Right 5' - ACATCGGCATCTCCTCCA
Sequence	BJ466722
PCR size	353