Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k03052

[Submit comment/correction]

Locus	k03052
Type	SNP
Chromosome	7H
Map	Hv-HNxH602-7H 260.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags34b15
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = -/A SNP structure (UNICODE) = AGCCCCTTGT-/ACAGACCGCTG Parent 1 SNP sequence = AGCCCCTTGT-CAGACCGCTG Parent 2 SNP sequence = AGCCCCTTGTACAGACCGCTG
Probe for Locus	bags34b15
Locus	k03052
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = Brittle-1 protein, chloroplast precursor pir JQ1459 Bt1 protein precursor - maize
Type	PCR
PCR primers	Left 5' - GCTTCCTGCAAGAAAAAGGA Right 5' - AACAATTCCCAACAATCGGA
Sequence	BJ466812
PCR size	352