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GrainGenes Marker Report: k03085

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Locus	k03085
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 343.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags37a05
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/G SNP structure (UNICODE) = TTCGGTGTGGSCGATGACAAG Parent 1 SNP sequence = TTCGGTGTGGCCGATGACAAG Parent 2 SNP sequence = TTCGGTGTGGGCGATGACAAG
Probe for Locus	bags37a05
Locus	k03085
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBa0018M05.10 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TCAAATGAGATTTACCGGGC Right 5' - CCAAGGCCATCAAATGAGTT
Sequence	BJ468079
PCR size	396