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GrainGenes Marker Report: k03089

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Locus	k03089
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 240.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags37i06
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = TTCCCTGATGYAGTTCTTCAA Parent 1 SNP sequence = TTCCCTGATGCAGTTCTTCAA Parent 2 SNP sequence = TTCCCTGATGTAGTTCTTCAA
Probe for Locus	bags37i06
Locus	k03089
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = unknown protein [Oryza sativa (japonica cultivar-group)] gb AAK43493.1 unknown protein [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CACATTCTTCGCCCTTGAAT Right 5' - AGCAAGAATGGTTTGGATGG
Sequence	BJ468182
PCR size	428