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GrainGenes Marker Report: k03090

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Locus	k03090
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 127
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags37k06
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = CACATAGAAAYTATCACGCCA Parent 1 SNP sequence = CACATAGAAACTATCACGCCA Parent 2 SNP sequence = CACATAGAAATTATCACGCCA
Probe for Locus	bags37k06
Locus	k03090
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = casein kinase-like protein [Oryza sativa (japonica cultivar-group)] dbj BAB56099.1 casein kinase-like protein [Oryza sativa (japonica culti
Type	PCR
PCR primers	Left 5' - GGGGACAATTTTGAGTGTGC Right 5' - ACCAAAACGGTAACAATCGC
Sequence	BJ468208
PCR size	374