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GrainGenes Marker Report: k03138

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Locus	k03138
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 153.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags37l16
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = A/G SNP structure (UNICODE) = CAGCACCAGGRGATGATGCAT Parent 1 SNP sequence = CAGCACCAGGAGATGATGCAT Parent 2 SNP sequence = CAGCACCAGGGGATGATGCAT
Probe for Locus	bags37l16
Locus	k03138
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = 26S proteasome non-ATPase regulatory subunit 6 (26S proteasome regulatory particle non-ATPase subunit 7) (OsRPN7)
Type	PCR
PCR primers	Left 5' - TAGGGTTCGTCGCTGCTAGT Right 5' - ACCAAAGAAGGAGGTGGCTT
Sequence	BJ468226
PCR size	355