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GrainGenes Marker Report: k03152

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Locus	k03152
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 48
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags38a17
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = CAGATAAACTYTCAAGAATGA Parent 1 SNP sequence = CAGATAAACTCTCAAGAATGA Parent 2 SNP sequence = CAGATAAACTTTCAAGAATGA
Probe for Locus	bags38a17
Locus	k03152
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBa0040D17.13 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - AAGATCCTGCTGATGATGGC Right 5' - CCCAGGATTGCAAAAACACT
Sequence	BJ468288
PCR size	359