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GrainGenes Marker Report: k03231

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Locus	k03231
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 126
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags39a22
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/A SNP structure (UNICODE) = CTCTTTTTCCMAGCCCCATAA Parent 1 SNP sequence = CTCTTTTTCCCAGCCCCATAA Parent 2 SNP sequence = CTCTTTTTCCAAGCCCCATAA
Probe for Locus	bags39a22
Locus	k03231
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBa0064H22.9 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - GCTAGCACAACCGGATTATTG Right 5' - ATGAAGATGGCTCAGGGGTT
Sequence	BJ468492
PCR size	478