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GrainGenes Marker Report: k03253

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Locus	k03253
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 134.8
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags38m08
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/C SNP structure (UNICODE) = AGACTTTACTYTGGTAGTAAT Parent 1 SNP sequence = AGACTTTACTTTGGTAGTAAT Parent 2 SNP sequence = AGACTTTACTCTGGTAGTAAT
Probe for Locus	bags38m08
Locus	k03253
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = carbonate dehydratase homolog T16L1.70 - Arabidopsis thaliana emb CAA20571.1 carbonate dehydratase-like protein [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - CGCATATGGATGCAAACAAG Right 5' - AAATTATCCCCGAAACCTGC
Sequence	BJ468427
PCR size	424